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Plate tab – Bio-Rad Firmware & Software Updates User Manual

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MiniOpticon Instruction Manual

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• Protocol AutoWriter. Selects default settings that appear in the Protocol AutoWriter,

including default Annealing Temperature for experiments that use iProof™, iTaq™, or
other polymerases and the default amplicon length

Figure 77. Protocol tab in the User Preferences window.

Plate Tab

Select the Plate tab in the User Preferences window (Figure 78) to specify the following default
settings for a new Plate file in the Plate Editor window:

• Plate Type. Select the default plate well type from the list

• Plate Size. Select the default plate size from the list

• Units. Select the units used to describe the concentration of the starting template for

wells that contain standards. The software uses these units to create a standard curve in
the Data Analysis Quantification tab

• Scientific Notation. Select scientific notation to view concentration units in that notation

• Scan Mode. Select a default scan mode to set the number of channels to scan during a

run

• Fluorophores. Click check boxes to select the default fluorophores that appear in the

Plate Editor well loading controls

• Libraries. Enter the target and sample names that you typically use in your experiments.

Enter target names to list genes and sequences, and enter sample names to list
conditions for experiment samples. These names appear in the lists of in the Targets tab
and Samples tab in the Experiment Settings window