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Clustergram – Bio-Rad Firmware & Software Updates User Manual

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MiniOpticon Instruction Manual

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Figure 68 shows the efficiency of all the targets, which appear if Auto Efficiency is selected.

Figure 68. Targets tab in the Experiment Settings window with Analysis Settings

selected.

To adjust the settings for a sample in the Samples tab:

• Click a color in the Color column to change the color of the samples graphed in the

Gene Expression chart

• Click a box in the Show Chart column to show the sample in the Gene Expression

chart using a color that is selected in the Color column

Figure 69 shows the samples with the Show Chart option selected.

Figure 69. Samples tab in Experiment Settings window with Analysis Settings selected.

Clustergram

A clustergram shows the data in a hierarchy based on the degree of similarity of expression for
different targets and samples.

NOTE: A reference target needs to be selected to display any of the data plots
other than relative expression for bar charts.