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Care and use manual, Iii. column use, A. sample preparation – Waters Peptide Separation Technology ACQUITY UPLC BEH130 and BEH300 User Manual

Page 3: B. ph range, Acquity uplc peptide beh c

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[ CARE AND USE MANUAL ]

ACQUITY UPLC Peptide BEH C

18

, 130Å and 300Å Columns

III. COLUMN USE

To ensure the continued high performance of ACQUITY UPLC Peptide
BEH C

18

, 130Å and 300Å Columns follow these guidelines:

a. Sample Preparation

1. Sample must be dissolved in a diluent compatiable with initial

strength of mobile phase.

2. Sample must be completely in solution and free of particulates.

3. To remove particulates the sample may be filted with a 0.2 µm

membrane. If the sample is dissolved in a solvent that contained
an organic modifier (e.g., acetronitrile, methanol, etc.) ensure
that the membrane material does not dissolve in the solvent.
Contact the membrane manufacturer with solvent compatibility

questions. Alternatively, centrifugation for 20 minutes at
8,000 rpm, followed by the transfer of the supernatant liquid to
an appropriate vial, could be considered.

b. pH Range

The recommended operating pH range for ACQUITY UPLC BEH columns
is 1 to 12. A listing of commonly used buffers and additives is given in
Table 2. Additionally, the column lifetime will vary depending upon the
operating temperature, the type and concentration of buffer used. For
example, the use of phosphate buffer at pH 8 or above in combination
with elevated temperatures will lead to shorter column lifetimes.

Table 2. Buffer Recommendations for Using ACQUITY UPLC Peptide BEH C

18

, 130Å and 300Å Columns from pH 1 to 12

Additive/Buffer

pKa

Buffer range

Volatility

(±1 pH unit)

Used for

Mass Spec

Comments

TFA

0.3

-

Volatile

Yes

Ion pair additive, can suppress MS signal, used in the
0.02-0.1% range.

Acetic Acid

4.76

-

Volatile

Yes

Maximum buffering obtained when used with ammonium acetate
salt. Used in 0.1-1.0% range.

Formic Acid

3.75

-

Volatile

Yes

Maximum buffering obtained when used with ammonium
formate salt. Used in 0.1-1.0% range

Acetate (NH

4

CH

2

COOH)

4.76

3.76 – 5.76

Volatile

Yes

Used in the 1-10 mM range. Note that sodium or potassium salts
are not volatile.

Formate (NH

4

COOH)

3.75

2.75 – 4.75

Volatile

Yes

Used in the 1-10 mM range. Note that sodium or potassium salts
are not volatile.

Phosphate 1

2.15

1.15 – 3.15

Non-volatile

No

Traditional low pH buffer, good UV transparency.

Phosphate 2

7.2

6.20 – 8.20

Non-volatile

No

Above pH 7, reduce temperature/concentration and use a guard
column to maximize lifetime.

4-Methylmorpholine

~8.4

7.4 – 9.4

Volatile

Yes

Generally used at 10 mM or less.

Ammonia (NH

4

OH)

9.2

8.2 – 10.2

Volatile

Yes

Keep concentration below 10 mM and temperatures
below 30 ˚C.

Ammonium Bicarbonate

10.3 (HCO

3

-

)

9.2 (NH

4

+

)

6.3 (H

2

CO

3

)

6.8 – 11.3

Volatile

Yes

Used in the 5-10 mM range (for MS work keep source >150 ˚C ).
Adjust pH with ammonium hydroxide or acetic acid. Good buffering
capacity at pH 10.

Note: use ammonium bicarbonate (NH

4

HCO

3

), not ammonium

carbonate ((NH

4

)

2

CO

3

).

Ammonium (Acetate)

9.2

8.2 – 10.2

Volatile

Yes

Used in the 1-10 mM range.

Ammonium (Formate)

9.2

8.2 – 10.2

Volatile

Yes

Used in the 1-10 mM range.

CAPSO

9.7

8.7 – 10.7

Non-Volatile

No

Zwitterionic buffer, compatible with acetonitrile, used in the
1-10 mM range. Low odor.

Glycine

2.4, 9.8

8.8 – 10.8

Non-Volatile

No

Zwitterionic buffer, can give longer lifetimes than borate buffer.

1-Methylpiperidine

10.2

9.3 – 11.3

Volatile

Yes

Used in the 1-10 mM range.

CAPS

10.4

9.5 – 11.5

Non-Volatile

No

Zwitterionic buffer, compatible with acetonitrile, used in the
1-10 mM range. Low odor.

Triethylamine

10.7

9.7 – 11.7

Volatile

Yes

Used in the 0.1-1.0% range. Volatile only when titrated with
acetic acid (not hydrochloric or phosphoric).

(as acetate salt) Pyrrolidine

11.3

10.3 – 12.3

Volatile

Yes

Used as ion-pair for DNA analysis at pH 7-9 Mild buffer, gives
long lifetime.

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