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Regression methods – Bio-Rad Image Lab™ Software User Manual

Page 79

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Setting Up a Default Protocol

User Guide

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Standard Lanes

Choose the lane that contains your standards by typing lane numbers or the words

First and Last in the Standard Lanes field. The format is xx, xx, xx, ... where xx is the

lane number. For example, if you run an 18-well gel and you want your standards in

lanes 1, 10, and 18, enter First, 10, and Last.

Note:

Lane detection works best when standards are placed in the first and

last lanes.

Regression Methods

A regression method is used to calculate the molecular weight of the unknown

bands. The software uses the relative front and molecular weight values of the

standard bands to calculate the standard curve. The standard curve is then used to

calculate the values of the unknown bands. The shape of the standard curve is

based on the selected regression method. Choose one of four regression methods.

The methods and the minimum number of standard bands required for each type

are shown in the following table.

Table 6.

Regression methods and minimum number of bands

Linear (semilog)

2

Point-to-point (semilog)

2

Logistic

5

Cubic spline

5

If you do not have enough data points for the selected method, the molecular

weight of the unknown bands is not calculated.

Select the appropriate method for the gel type:

Gradient gels: The linear (semilog) regression method works well for these

gels because the mobility of the bands is linear to the log of their molecular

Regression Method

Minimum Number of
Standard Bands

This manual is related to the following products: