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12 calculation, 1 nucleic acids (dsdna, ssdna, rna, oligo) – Eppendorf BioPhotometer User Manual

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12 Calculation

12.1 Nucleic acids (dsDNA, ssDNA, RNA, oligo)

Calculation via factor

C

= A

260

x F

C

= Calculated concentration

A

260

= Absorbance measured at 260 nm

F

= Factor (method-specific programming using the

key)

The nucleic acid methods have the following special feature: The programmed factor is always based on the
unit of concentration "

µ

g/mL". If the unit of concentration "

µ

g/

µ

L" is selected, the factor is converted internally:

F’ = F / 1000
F’ = Converted factor; used for the calculation of the concentration.

Sample dilution

C

Dil, corr

= C x (V

P

+ V

Dil

) / V

P

C

Dil, corr

= Result converted using dilution factor

V

P

= Volume of the sample in the measuring solution (entered using the

key)

V

Dil

= Volume of the diluent in the measuring solution (entered using the

key)

Optical path length of the cuvette

Application: Using cuvettes with an optical path length of 1 mm, 2 mm or 5 mm.

The optical path length of the cuvette can be programmed for each method using the

key.

A

cuv, corr

= A x 2 (with an optical path length of 5 mm)

A

cuv, corr

= A x 5 (with an optical path length of 2 mm)

A

cuv, corr

= A x 10 (with an optical path length of 1 mm)

A

cuv, corr

= Absorbance converted in accordance with an optical path length of 10 mm

Correction A

320

Application: Partial correction of incorrect absorbance caused by turbidity in the measuring solution.

The calculation procedure with or without correction A

320

can be programmed for each method using the

key.

A

x, corr

= A

x

- A

320

A

x, corr

= Absorbance at wavelength of 230, 260 and 280 nm, corrected mathematically

A

x

= Absorbance measured at wavelength of 230, 260 and 280 nm

A

320

= Absorbance measured at wavelength of 320 nm

The corrected absorbance is used for further calculation of results.

Conversion key: Calculating the quantity

Application: Calculating the quantity of nucleic acid in the total sample volume.

M

= C x V

P, total

M

= Calculated overall quantity of nucleic acid in sample vessel

C

= Calculated concentration

V

P, total

= Volume of the sample in the sample vessel (entered using the

key)

Parameter

Dilution

Dilution

Parameter

Parameter

Conversion

12 Calculation

12_Auswertg_e.fm Seite 86 Montag, 20. Februar 2006 11:34 Uhr