Chapter 12: troubleshooting, Troubleshooting – Bio-Rad Mini-PROTEAN® TGX™ Precast Gels for 2-D Electrophoresis User Manual
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Troubleshooting
12
Problem
Cause
Solution
Current is zero or less than
expected, and samples do not
migrate into gel
Tape at bottom of cassette not removed Remove tape
Insufficient buffer in inner buffer
chamber
Fill buffer chamber with running buffer
Insufficient buffer in outer buffer
chamber
Fill inner and outer chambers to ensure
wells of the gels are completely covered
Incorrect cassette orientation
Ensure shorter plate is facing gasket
Electrical disconnection
Check electrodes and connections
Gels run faster than expected
Running buffer too concentrated or
incorrect
Check buffer composition
Gel temperature too high
Do not exceed recommended running
conditions
Gels run more slowly than expected
Companion running module left in tank
when running only 1–2 gels
Remove companion running module
Buffer leaking from inner chamber
Incomplete gasket seal
Wet gasket with running buffer before use
Improper assembly of the gel into the
electrode/companion module
Top edge of short plate should fit under
notch at top of gasket
Top of short plate should touch green
gasket
Bands “smile” across gel: band
pattern curves upward at both
sides of gel
Excessive heating of gel
Check buffer composition
Do not exceed recommended running
conditions
Insufficient buffer
Fill inner and outer chambers to ensure
wells of gels are completely covered
Bands “smile” or “frown” within gel
lanes
Protein load too high
Load less protein
Sample or buffer preparation issues
Minimize salts, detergents, and solvents
in sample preparation and sample loading
buffers
Incorrect running conditions
Set correct voltage
Table 12 .1 . Troubleshooting electrophoresis and detection with Mini-PROTEAN
®
gels . For more troubleshooting tips,
refer to the relevant instrument instruction manuals or contact Technical Support.