Bio-Rad ProteinChip Data Manager Software - Manual (Page 21)

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ProteinChip SELDI System: Reader Guide
Fig. 13: Collecting data in Manual Mode (Enterprise Edition).
Protocol Mode
Protocol Mode allows you to apply and run existing protocols on arrays or
spots. All data will be collected using the currently selected protocol (displayed
at the top of the Protocol Mode tab). The protocol settings can be adjusted by
clicking the Protocol Settings button beside the Cassette/Spot map (the
Spot/Pixel Selector, if using the Personal Edition). The Partitions settings
indicate which parts of each spot will be used. Protocol Mode can also be used
for creating protocols from templates, and for modifying existing protocols.
Click the Run button to begin data collection.
Click the Stop Run button to halt data acquisition.