Multichannel Systems NeuroExplorer User Manual
Neuroexplorer manual
Table of contents
Document Outline
- 1. Getting Started
- 1.1. Getting Started with NeuroExplorer
- 1.2. Working with Sentinel Keys
- 1.3. NeuroExplorer Screen Elements
- 1.4. Opening Files and Importing Data
- 1.5. Importing Files Created by Data Acquisition Systems
- 1.6. Importing Data from Text Files
- 1.7. Importing Data from Spreadsheets
- 1.8. Importing Data from Matlab
- 1.9. Reading and Writing NeuroExplorer Data Files
- 1.10. 1D Data Viewer
- 1.11. Analyzing Data
- 1.12. Selecting Variables for Analysis
- 1.13. How to Select Variables for Existing Window
- 1.14. How to Select Variables in Variables Panel
- 1.15. Adjusting Analysis Properties
- 1.16. Analysis Templates
- 1.17. Numerical Results
- 1.18. Post-processing
- 1.19. Saving Results as Power Point Slides
- 1.20. Working with Matlab
- 1.21. Working with Excel
- 1.22. Saving Graphics
- 2. Analysis Reference
- 2.1. Data Types
- 2.2. Data Selection Options
- 2.3. Post-Processing Options
- 2.4. Matlab Options
- 2.5. Excel Options
- 2.6. Confidence Limits for Perievent Histograms
- 2.7. Cumulative Sum Graphs
- 2.8. Rate Histograms
- 2.9. Interspike Interval Histograms
- 2.10. Autocorrelograms
- 2.11. Perievent Histograms
- 2.12. Crosscorrelograms
- 2.13. Shift-Predictor for Crosscorrelograms
- 2.14. Rasters
- 2.15. Perievent Rasters
- 2.16. Joint PSTH
- 2.17. Cumulative Activity Graphs
- 2.18. Instant Frequency
- 2.19. Interspike Intervals vs. Time
- 2.20. Poincare Maps
- 2.21. Synchrony vs. Time
- 2.22. Trial Bin Counts
- 2.23. Power Spectral Densities
- 2.24. Burst Analysis
- 2.25. Principal Component Analysis
- 2.26. PSTH Versus Time
- 2.27. Correlations with Continuous Variable
- 2.28. Regularity Analysis
- 2.29. Place Cell Analysis
- 2.30. Reverse Correlation
- 2.31. Epoch Counts
- 2.32. Coherence Analysis
- 2.33. Spectrogram Analysis
- 2.34. Perievent Spectrograms
- 2.35. Joint ISI Distribution
- 2.36. Autocorrelograms Versus Time
- 3. Working with Graphics
- 4. Working with 3D Graphics
- 5. Programming with NexScript
- 5.1. Script Variables
- 5.2. File Variables
- 5.3. Expressions
- 5.4. Flow Control
- 5.5. Functions
- 5.5.1. File Read and Write Functions
- 5.5.1.1. GetFileCount Function
- 5.5.1.2. GetFileName Function
- 5.5.1.3. OpenFile Function
- 5.5.1.4. CloseFile Function
- 5.5.1.5. ReadLine Function
- 5.5.1.6. WriteLine Function
- 5.5.1.7. OpenDocument Function
- 5.5.1.8. NewDocument Function
- 5.5.1.9. CloseDocument Function
- 5.5.1.10. SaveDocument Function
- 5.5.1.11. SaveDocumentAs Function
- 5.5.1.12. SaveNumResults Function
- 5.5.1.13. SaveNumSummary Function
- 5.5.1.14. SaveAsTextFile Function
- 5.5.1.15. MergeFiles Function
- 5.5.1.16. ReadBinary Function
- 5.5.1.17. FileSeek Function
- 5.5.1.18. SelectFile Function
- 5.5.2. Document Properties Functions
- 5.5.3. Document Variables Functions
- 5.5.3.1. GetVarCount Function
- 5.5.3.2. GetVarName Function
- 5.5.3.3. GetVarSpikeCount Function
- 5.5.3.4. GetVar Function
- 5.5.3.5. DeleteVar Function
- 5.5.3.6. Delete Function
- 5.5.3.7. GetVarByName Function
- 5.5.3.8. NewEvent Function
- 5.5.3.9. NewIntEvent Function
- 5.5.3.10. NewPopVector Function
- 5.5.3.11. GetContNumDataPoints Function
- 5.5.3.12. NewContVar Function
- 5.5.3.13. CopySelectedVarsToAnotherFile Function
- 5.5.4. Variable Selection Functions
- 5.5.4.1. IsSelected Function
- 5.5.4.2. Select Function
- 5.5.4.3. Deselect Function
- 5.5.4.4. SelectVar Function
- 5.5.4.5. DeselectVar Function
- 5.5.4.6. Select Function
- 5.5.4.7. Deselect Function
- 5.5.4.8. SelectAll Function
- 5.5.4.9. DeselectAll Function
- 5.5.4.10. SelectAllNeurons Function
- 5.5.4.11. SelectAllEvents Function
- 5.5.4.12. EnableRecalcOnSelChange Function
- 5.5.4.13. DisableRecalcOnSelChange Function
- 5.5.5. Properties of Variables Functions
- 5.5.6. Analysis Functions
- 5.5.6.1. ApplyTemplate Function
- 5.5.6.2. ApplyTemplateToWindow Function
- 5.5.6.3. PrintGraphics Function
- 5.5.6.4. Dialog Function
- 5.5.6.5. ModifyTemplate Function
- 5.5.6.6. RecalculateAnalysisInWindow Function
- 5.5.6.7. EnableRecalcOnSelChange Function
- 5.5.6.8. DisableRecalcOnSelChange Function
- 5.5.6.9. SendGraphicsToPowerPoint Function
- 5.5.6.10. SaveGraphics Function
- 5.5.7. Numerical Results Functions
- 5.5.7.1. GetNumRes Function
- 5.5.7.2. GetNumResNCols Function
- 5.5.7.3. GetNumResNRows Function
- 5.5.7.4. GetNumResColumnName Function
- 5.5.7.5. SendResultsToExcel Function
- 5.5.7.6. GetNumResSummaryNCols Function
- 5.5.7.7. GetNumResSummaryNRows Function
- 5.5.7.8. GetNumResSummaryColumnName Function
- 5.5.7.9. GetNumResSummaryData Function
- 5.5.7.10. SendResultsSummaryToExcel Function
- 5.5.7.11. SaveNumResults Function
- 5.5.7.12. SaveNumSummary Function
- 5.5.8. Operations on Variables Functions
- 5.5.8.1. Rename Function
- 5.5.8.2. Join Function
- 5.5.8.3. Sync Function
- 5.5.8.4. NotSync Function
- 5.5.8.5. FirstAfter Function
- 5.5.8.6. FirstNAfter Function
- 5.5.8.7. LastBefore Function
- 5.5.8.8. IntervalFilter Function
- 5.5.8.9. SelectTrials Function
- 5.5.8.10. SelectRandom Function
- 5.5.8.11. SelectEven Function
- 5.5.8.12. SelectOdd Function
- 5.5.8.13. ISIFilter Function
- 5.5.8.14. FirstInInterval Function
- 5.5.8.15. LastInInterval Function
- 5.5.8.16. StartOfInterval Function
- 5.5.8.17. EndOfInterval Function
- 5.5.8.18. MakeIntervals Function
- 5.5.8.19. MakeIntFromStart Function
- 5.5.8.20. MakeIntFromEnd Function
- 5.5.8.21. IntOpposite Function
- 5.5.8.22. IntOr Function
- 5.5.8.23. IntAnd Function
- 5.5.8.24. IntSize Function
- 5.5.8.25. IntFind Function
- 5.5.8.26. MarkerExtract Function
- 5.5.8.27. Shift Function
- 5.5.8.28. NthAfter Function
- 5.5.8.29. PositionSpeed Function
- 5.5.8.30. FilterContinuousVariable Function
- 5.5.8.31. LinearCombinationOfContVars Function
- 5.5.8.32. DecimateContVar Function
- 5.5.9. Matlab Functions
- 5.5.10. Excel Functions
- 5.5.11. Power Point Functions
- 5.5.12. Running Script Functions
- 5.5.13. Math Functions
- 5.5.13.1. seed Function
- 5.5.13.2. expo Function
- 5.5.13.3. floor Function
- 5.5.13.4. ceil Function
- 5.5.13.5. round Function
- 5.5.13.6. abs Function
- 5.5.13.7. sqrt Function
- 5.5.13.8. pow Function
- 5.5.13.9. exp Function
- 5.5.13.10. min Function
- 5.5.13.11. max Function
- 5.5.13.12. log Function
- 5.5.13.13. sin Function
- 5.5.13.14. cos Function
- 5.5.13.15. tan Function
- 5.5.13.16. acos Function
- 5.5.13.17. asin Function
- 5.5.13.18. atan Function
- 5.5.13.19. RoundToTS Function
- 5.5.13.20. GetFirstGE Function
- 5.5.13.21. GetFirstGT Function
- 5.5.13.22. GetBinCount Function
- 5.5.13.23. BitwiseAnd Function
- 5.5.13.24. BitwiseOr Function
- 5.5.13.25. GetBit Function
- 5.5.14. String Functions
- 5.5.15. Debug Functions
- 5.5.1. File Read and Write Functions
- 6. COM/ActiveX Interfaces
- 6.1. Application
- 6.2. Document
- 6.2.1. Path Property
- 6.2.2. FileName Property
- 6.2.3. Comment Property
- 6.2.4. TimestampFrequency Property
- 6.2.5. StartTime Property
- 6.2.6. EndTime Property
- 6.2.7. VariableCount Property
- 6.2.8. NeuronCount Property
- 6.2.9. EventCount Property
- 6.2.10. IntervalCount Property
- 6.2.11. MarkerCount Property
- 6.2.12. WaveCount Property
- 6.2.13. ContinuousCount Property
- 6.2.14. Variable Method
- 6.2.15. Neuron Method
- 6.2.16. Event Method
- 6.2.17. Interval Method
- 6.2.18. Marker Method
- 6.2.19. Wave Method
- 6.2.20. Continuous Method
- 6.2.21. DeselectAll Method
- 6.2.22. SelectAllNeurons Method
- 6.2.23. SelectAllContinuous Method
- 6.2.24. ApplyTemplate Method
- 6.2.25. GetNumericalResults Method
- 6.2.26. Close Method
- 6.3. Variable
- 6.3.1. Name Property
- 6.3.2. TimestampCount Property
- 6.3.3. Timestamps Method
- 6.3.4. IntervalStarts Method
- 6.3.5. IntervalEnds Method
- 6.3.6. FragmentTimestamps Method
- 6.3.7. FragmentCounts Method
- 6.3.8. ContinuousValues Method
- 6.3.9. MarkerValues Method
- 6.3.10. WaveformValues Method
- 6.3.11. Select Method
- 6.3.12. Deselect Method